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UW chemistry
Professor Helen Blackwell (back) watches her
graduate student Reto Frei, as he synthesizes
compounds on filter paper in her Madison, Wisconsin
lab.
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MILWAUKEE -
When bacteria start talking, bad things happen.
Many bacteria
release chemical signals in search of their
"friends." When chemical levels remain low, the
bacteria don't make much mischief. But when the bugs
congregate, chemicals build up, which alerts the microbes
that there are enough of them to kick off an infection.
These
collective infections can be especially severe and hard to
treat. But Helen Blackwell, a University of
Wisconsin-Madison assistant professor of chemistry, thinks
she's found a way to stop these bacterial social gatherings
before they start.
By mimicking
the chemicals that bacteria use to talk to each other,
Blackwell is working to develop new drugs to trick the
microbes.
And the
approach has shown success.
Already,
Blackwell's group has found many new compounds to block the
chemical conversations behind two of the most common sources
of hospital-acquired infections: methicillin-resistant
Staphylococcus aureus, or MRSA; and Pseudomonas aeruginosa,
an opportunistic invader of patients with compromised immune
systems.
Drugs that
target the microbes' social traits, rather than killing
every individual, might offer another bonus in the fight
against bacterial super-bugs: They should also slow the rate
at which bacteria develop drug resistance compared with
traditional drug approaches.
"You're
not actually killing the bugs, so there's not the selective
pressure in the same way," said Steve Diggle, a
microbiologist at the University of Nottingham in England,
who specializes in studying bacterial communication.
"You're
targeting the group as a whole. You're tackling billions of
individuals. So, it's a lot less likely that they'll evolve
resistance."
RESPONSES
TRIGGERED
The
bacteria's communication system, known as "quorum
sensing," triggers a wide range of responses, including
virulence factor production, glowing bioluminescence and the
formation of slimy bacterial mats called biofilms - the
primary source of dental plaque and numerous chronic
infections.
Importantly
for Blackwell, a chemist trained in stitching together
molecules, the bacterial chatter is spoken in the language
of small molecules - a group of compounds that are smaller
than proteins yet biologically active.
"Since
the whole system is mediated by small molecules, it's like a
sandbox for chemists to play in," said Blackwell, who
was named one of Popular Science magazine's "Brilliant
10" last year.
To explain
the game of synthesizing small molecules, Reto Frei, one of
Blackwell's graduate students, grabbed a Sharpie pen and
started scribbling on the glass front of the laboratory fume
hood.
He sketched a
thick, flat line showing the filter paper they use as base.
The filter paper costs only pennies apiece, and it can be
manipulated much more easily than traditional techniques
dependent on resin-based substrates, Frei said.
Frei then
drew in evenly spaced little spikes, or "mini
skyscrapers" as he called them, in a spreadsheet-like
grid on the paper. On top of the spikes, Blackwell's team
mixes and matches chemicals to create vast arrays of
different chemical combinations, he explained.
To make the
chemicals react quickly, they pop the spotted paper into an
industrial-grade microwave oven, which helps generate
hundreds of molecules within a matter of minutes to hours.
"If you
do traditional chemistry in solution, it would take a whole
day to make one compound," said Thanit Praneenararat,
another graduate student.
The dizzying
array of new molecules alone is not the goal. "I'm most
excited not about the novel compounds but about the novel
activity," Blackwell said.
PROMISE SHOWN
Among all the
new compounds Blackwell and her students have synthesized, a
dozen or so are showing promising biological activity.
Some of these
work well specifically against Pseudomonas aeruginosa and
other related Gram-negative bacteria, the group that causes
the majority of hospital infections.
Blackwell's
approach starts with the microbe's own signaling molecule,
which usually turns on biofilm formation at sufficient
concentrations. But Blackwell makes slightly modified
analogs to out-compete the natural molecule in binding to
its receptor.
In this way,
she found that by adding a large chemical ring
"dumbbell" onto the molecule's tail, sprinkled
with highly reactive halogen elements, she could
significantly blunt the bug's signaling ability, both in a
lab dish and inside other organisms.
For a study
published online last month in the ISME Journal, Blackwell
teamed up with Jo Handelsman, a University of
Wisconsin-Madison professor of bacteriology and plant
pathology, to show that her signaling inhibitors reduced
Pseudomonas' infectivity of cabbage white butterfly larvae
by more than 50 percent.
"This
inhibitor is doing awfully well," Handelsman said.
"It's pretty strong evidence that you can introduce a
chemical inhibitor to block quorum sensing and pathogen
induction."
Blackwell
doesn't always want to turn the bacterial dialogue off,
however.
For
"good" bacteria, such as those that can slurp up
pollution or manufacture biofuels, Blackwell and her
research team are also looking for molecules that promote
cell signaling.
As a glowing
endorsement to this approach, Blackwell, with UW-Madison
medical microbiology and immunology professor Edward Ruby,
discovered a molecule that induces bacterial signaling in
Vibrio fischeri, a luminescent bacterium that resides in the
light organ of the Hawaiian bobtail squid.
In an as-yet
unpublished study, Blackwell and Ruby added their molecule
into the squid's sea water, and the organ lighted up like a
neon sign. "We believe the compounds freely diffused up
into the light organ of the animal, interacted with the
bacteria," and made it glow, Blackwell said.
TAKING ON A
KILLER
Blackwell is
also turning toward preventing cell-cell communication in
Staphylococcus aureus, the bacterium legendary for its
highly resilient form, MRSA, which kills tens of thousands
of people in hospitals every year.
Staphylococcus,
however, is part of the so-called Gram-positive group of
bacteria, a completely different class than Pseudomonas. As
such, its cell signaling follows a different, more elaborate
pathway than the simpler system of Gram-negative bacteria.
"There are many more players involved," said
Blackwell.
In June,
Blackwell published a paper in the journal Organic Letters
reporting synthesis of the first non-natural protein-like
molecule that blocks part of the notorious super-bug's
communication pathway.
"Helen
(Blackwell) is an example of one of the very, very best
chemists that works well with biologists," said
Handelsman.
The goal in
the long run, Blackwell said, is to develop her compounds
into therapeutic agents.
Unfortunately,
most large pharmaceutical companies are no longer involved
in antibiotic research and development, because the drugs
are not seen as profitable. Blackwell hopes academic-driven
research can fill the gap.
This is
especially urgent as current antibiotics are reaching the
limits of their effectiveness with resistant bacterial
strains continuing to spread around the world.
"It's
reaching crisis proportion," Blackwell said. "This
is going to become a real issue in the next decade."